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The molecular recognition of complex carbohydrates by proteins at
the surfaces of mammalian cells and of microbes is the basis of their
biological function. We utilize the power of chemical synthesis to
create modified antigens that can reveal the structural basis of
the recognition of carbohydrate antigens by antibodies and lectins.
In turn our appreciation of the fine structure of numerous carbohydrate
antigen-antibody complexes facilitates the design of conjugate vaccines
for applications in cancer therapy and for prevention of serious
microbial infections (Proc. Natl. Acad. Sci (USA), 105,
13526-13531, 2008).
Our group has had a long standing interest in the chemistry and
glycobiology of complex carbohydrate antigens of bacterial and mammalian
cells. Our earlier work included development of methods to synthesize
and utilize neoglyconconjuagtes, for example in the creation of monoclonal
antibodies with well-defined binding profiles. Subsequently these
antibodies were the topic of interdisciplinary collaborations that
resulted in the first crystal structures of an oligosaccharide-Fab
complex and characterization of the energetics of the molecular recognition
event by isothermal titration microcalorimetry. The group was also
active in the application of NMR methods to primary antigen structure
determination and to the determination of solution conformation in
the free and bound state.
Since our group moved to the University of Alberta, we have continued
to utilize and combine the tools of synthetic chemistry, biophysics
and structural biology to address questions related to the intrinsically
weak interactions that characterize sugar-protein interactions. We
have combined three dimensional structural detail with studies of
antibody-antigen interactions by physical methods including NMR and
microcalorimetry, and we are using the well defined structural details
of a variety of carbohydrate binding sites to pursue the rationale
design of high affinity ligands. A recent success involved the design
of a high avidity ligand for the Shiga like toxin responsible for
the diseases that result from pathogenic E. coli O157 (Nature, 403,
669-672, 2000). This result was characterized by Professor Fraser
Stoddart as "one of the most impressive applications of
glycoscience to have been described in the literature to date" (Bioconjugate
Chemistry, 12, 655-672, 2001). A second generation inhibitor
based on heterobifunctional ligands protects mice against this toxin
(Proc. Natl. Acad. Sci (USA), 105, 16837-16842,
2008).

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